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Job DescriptionP23842
Confidence49.70%DateThu Jan 5 11:39:48 GMT 2012
Rank232Aligned Residues99
% Identity15%Templatec3cnbC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   618.620.........630.........640.........650.........660.........670.........680.........690.......
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Query Sequence  SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE
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Template Sequence  DDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLD. . . . . LMMVGMDGFSICHRIKSTPATANIIVIAM
Template Known Secondary structure  S

TTS
ST

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TTS
TSTTTTTS
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   73......80.........90.........100.........110........ .120.........130.........140.......
 
   698.700. ........710.........720.....
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Query Sequence  FVET. QQQQALLHKLGVQYLQGYLIGRPQ
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Template Sequence  TGALTDDNVSRIVALGAE. . . . TCFGKPL
Template Known Secondary structure  SS

TT
S....SS
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   148.150.........160..... ....170..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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