Job Description P23842 Confidence 39.44% Date Thu Jan 5 11:39:48 GMT 2012 Rank 275 Aligned Residues 103 % Identity 7% Template c3b0vD_ PDB info PDB header:oxidoreductase/rna Chain: D: PDB Molecule:trna-dihydrouridine synthase; PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna Resolution 3.51 Å

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		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.		.	.	.	.	.	.	.	640										.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.									.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query SS confidence																					.									.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query Sequence		E	Q	A	F	S	N	A	E	S	S	M	Y	N	I	E	Q	L	H	K	.	F	G	F	R	I	A	I	D	.	.	.	.	.	.	.	.	.	D	F	G	T	G	Y	A	N	Y	E	R	L	K	R	L	Q	A	D	I	I	K	I	D	G	V	F	V	K	D	I	V	T	N	T	L	D	A	M	I	.	.	.	.
Query Conservation																					.									.	.	.	.	.	.	.	.	.																																								.	.	.	.
Alig confidence																					.									.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation
Template Sequence		A	C	L	L	L	D	L	A	R	V	R	E	I	L	K	A	X	G	E	A	V	R	V	P	V	T	V	K	X	R	L	G	L	E	G	K	E	T	Y	R	G	L	A	Q	S	V	E	A	X	A	E	A	G	V	K	V	F	V	V	H	A	R	S	A	L	L	A	L	S	T	K	A	N	R	E	I	P	P	L	R
Template Known Secondary structure		G	G	G	G	G														T	T		S	S								S		B	T	T																	T	T									S		B		T	T	S		T	T	G	G	G	T	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		680	.	.	.	.	.	.	.	.	.	690		.	.	.	.	.	.	.	.		.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure													.									.
Query SS confidence													.									.
Query Sequence		V	R	S	I	T	D	L	A	K	A	K	.	S	L	S	V	V	A	E	F	.	V	E	T	Q	Q	Q	Q	A	L	L	H	K	L	G	V	Q	Y	L	Q
Query Conservation													.									.
Alig confidence													.									.													.
Template Conservation																																			.
Template Sequence		H	D	W	V	H	R	L	K	G	D	F	P	Q	L	T	F	V	T	N	G	G	I	R	S	L	E	E	A	L	F	H	L	K	.	R	V	D	G	V	X
Template Known Secondary structure													T	T	S						S	S			S									T	.	T	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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