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Job DescriptionP23842
Confidence82.77%DateThu Jan 5 11:39:48 GMT 2012
Rank77Aligned Residues74
% Identity11%Templatec2ya0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative alkaline amylopullulanase; PDBTitle: catalytic module of the multi-modular glycogen-degrading2 pneumococcal virulence factor spua
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   618.620.........630........ .640.... .....650.........660.........670.
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Query Sequence  SNAESSMYNIEQLHKFGFRIA. . . . IDDFGT. . . . . . . . . . . . . . . . . . . . . . GYANYERLKRLQADIIKIDGVFVKDIV
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Template Sequence  GTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYD. . . . . . . . PQNYFSLTGMYSSDPK
Template Known Secondary structure  TSTTT
SS

B
BSS
BGGGTTS


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   158.160.........170.........180.........190.........200.........210... ......220.........
 
   672.......680.........690.........
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Query Sequence  TNTLDAMIVRSITDLAKAKSLSVVAEFV
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Template Sequence  NPEKRIAEFKNLINEIHKRGMGAILDVV
Template Known Secondary structure  STTTT

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   230.........240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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