Job Description P23842 Confidence 100.00% Date Thu Jan 5 11:39:48 GMT 2012 Rank 9 Aligned Residues 228 % Identity 30% Template c2r6oB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative diguanylate cyclase/phosphodiesterase (ggdef & eal PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from thiobacillus denitrificans Resolution 1.80 Å

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		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		L	L	L	N	T	I	R	T	A	L	D	Q	G	D	L	L	L	Y	A	Q	P	I	R	N	K	E	G	E	G	Y	.	.	D	E	I	L	A	R	L	K	Y	D	G	G	I	M	T	P	D	K	F	L	P	L	I	A	Q	F	N	L	S	A	R	F	D	L	Q	V	L	E	S	L	L	K	W	L	A	T	H	P
Query Conservation																																.	.
Alig confidence																																.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	D	T	R	L	R	Q	A	L	E	R	N	E	L	V	L	H	Y	Q	P	I	V	E	L	A	S	G	R	I	V	G	G	E	A	L	V	R	W	E	D	D	T	G	L	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	L	S	D	W	V	L	E	A	C	C	T	Q	L	R	A	W	Q	Q	Q	G
Template Known Secondary structure													T	T												T	T	T	T																					.	.	.	.	.	.	.	.	.	.	.	.																			T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.													.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	K	K	G	P	R	F	S	V	N	L	M	P	L	T	L	L	Q	K	N	I	A	G	R	I	I	R	L	F	K	R	Y	H	I	S	P	Q	A	V	I	L	E	I	T	E	E	Q	A	F	S	N	A	E	S	S	M	Y	N	I	E	Q	L	H	K	F	G	F	R	I	A	I	D	D	F	G	T	G	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	D	D	L	T	L	S	V	N	I	S	T	R	Q	F	E	G	E	H	L	T	R	A	V	D	R	A	L	A	R	S	G	L	R	P	D	C	L	E	L	E	I	T	E	N	V	X	L	V	X	T	D	E	V	R	T	C	L	D	A	L	R	A	R	G	V	R	L	A	L	D	D	F	G	T	G	Y	S
Template Known Secondary structure			S		T	T									G	G	G	G	S	T	T																	G	G	G							G	G	G	G	G	G															T	T									T	S	S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	E	R	L	K	R	L	Q	A	D	I	I	K	I	D	G	V	F	V	K	D	I	V	T	N	T	L	D	A	M	I	V	R	S	I	T	D	L	A	K	A	K	S	L	S	V	V	A	E	F	V	E	T	Q	Q	Q	Q	A	L	L	H	K	L	G	V	Q	Y	L	Q	G	Y	L	I	G	R	P	Q	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	S	Y	L	S	Q	L	P	F	H	G	L	K	I	D	Q	S	F	V	R	K	I	P	A	H	P	S	E	T	Q	I	V	T	T	I	L	A	L	A	R	G	L	G	X	E	V	V	A	E	G	I	E	T	A	Q	Q	Y	A	F	L	R	D	R	G	C	E	F	G	Q	G	N	L	X	S	T	P	Q	A	A
Template Known Secondary structure									S													T	T	T	T	T																			T										S									T	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		728	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		734	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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