Return to main results Retrieve Phyre Job Id

Job DescriptionP23842
Confidence53.29%DateThu Jan 5 11:39:48 GMT 2012
Rank217Aligned Residues71
% Identity13%Templatec2qpuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amylase type a isozyme; PDBTitle: sugar tongs mutant s378p in complex with acarbose
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   618.620.........630....... ..640.........650.........660.... .....670.........680.........690.....
Predicted Secondary structure 




.








.









Query SS confidence 



















.


























.






























Query Sequence  SNAESSMYNIEQLHKFGFRI. AIDDFGTGYANYERLKRLQADIIKIDG. VFVKDIVTNTLDAMIVRSITDLAKAKSLSVV
Query Conservation              
   
   . 




 
  
   
     
 



 .  
               
   
       
Alig confidence 



















.




...


















.

........




















Template Conservation 

  

  




  


 



 

...      


   

  

    ........

  


 

  

  

 

Template Sequence  GWYNMMMGKVDDIAAAGVTHVWLPPP. . . SHSVSNEGYMPGRLYDIDASKY. . . . . . . . GNAAELKSLIGALHGKGVQAI
Template Known Secondary structure 
GGGTT




...S
BSSTTS
SB

TT
GGG
SS........

TT
Template Predicted Secondary structure 








...


















........




Template SS confidence 















































































   18.20.........30.........40... ......50.........60..... ....70.........80......
 
   696...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  AEFV
Query Conservation 



Alig confidence 



Template Conservation 

 
Template Sequence  ADIV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   87..90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions