 |
Job Description | P23842 | Confidence | 25.13% | Date | Thu Jan 5 11:39:48 GMT 2012 |
Rank | 362 | Aligned Residues | 129 |
% Identity | 19% | Template | c2pgwC_ |
PDB info |
PDB header:isomerase | Chain: C: PDB Molecule:muconate cycloisomerase; |
PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021
|
Resolution | 1.95 Å |
|
 |
  |   |
556 | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | S | L | L | K | W | L | A | T | H | P | C | D | K | K | G | P | R | F | S | V | N | L | M | P | L | T | L | L | Q | K | N | I | A | G | R | I | I | R | L | F | K | R | Y | H | I | S | P | Q | A | V | I | L | E | I | T | E | E | Q | A | F | S | N | A | E | S | S | M | Y | N | I | E | Q | L | H | K | F | G | F |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|   | . | . |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   | . | . |   |   |   |   |
|
Template Sequence |   |
E | K | L | D | L | E | I | T | A | A | V | R | G | E | I | G | D | A | R | L | R | . |
. |
L | D | A | N | E | G | W | S | V | H | D | A | I | N | X | C | R | K | L | E | K | Y | D | . |
. |
. |
. |
. |
. |
. |
I | E | F | I | E | Q | P | T | V | S | W | S | I | P | A | X | A | H | V | R | . |
. |
E | K | V | G | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|  |  |  | . | . |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| . | . | . | . | . | . | . |
| S |  |  |  |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  | . | . |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
. | . | 240 | . | . |
  |
  |   |
636 | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | |
. | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | |
. | 700 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
R | I | A | I | D | D | F | G | T | G | Y | A | N | Y | E | R | L | K | R | L | Q | . |
A | D | I | I | K | I | D | G | V | F | V | K | D | I | V | T | N | T | L | D | A | M | I | V | R | S | I | T | D | L | A | K | A | K | S | L | S | V | V | A | E | F | . |
V | E | T | Q |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   | . |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
| . |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
Template Sequence |   |
P | I | V | A | D | Q | A | A | F | T | L | Y | D | V | Y | E | I | C | R | Q | R | A | A | D | X | I | C | I | G | P | R | E | I | G | G | I | Q | P | . |
. |
. |
. |
. |
. |
. |
X | X | K | A | A | A | V | A | E | A | A | G | L | K | I | C | I | H | S | S | F | T | T | G |
Template Known Secondary structure |   |
|  |  |  | S | T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|  |  |  |  | T | S |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
|
| S |
|
|  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|