 |
| Job Description | P23842 | | Confidence | 26.30% | Date | Thu Jan 5 11:39:48 GMT 2012 |
| Rank | 355 | Aligned Residues | 70 |
| % Identity | 14% | Template | c2p88E_ |
| PDB info |
PDB header:lyase | Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme |
PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579
|
| Resolution | 2.40 Å |
|
| | |
625 | . | . | . | . | 630 | . | . | . | |
. | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | |
. | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | |
. | 700 | . |
| Predicted Secondary structure | |
 | | | | | | | |
| . |
|
|  | | | |  |
|
|
|
|
| | | | | | | | | |
|
| . |
|
| | | | | | | | | |
|
|
|
|
|
| | | | | | | | | | | | | | | | |
|
|
|
| | | | | | . |
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| Query Sequence | |
Y | N | I | E | Q | L | H | K | F | . |
G | F | R | I | A | I | D | D | F | G | T | G | Y | A | N | Y | E | R | L | K | R | L | Q | . |
A | D | I | I | K | I | D | G | V | F | V | K | D | I | V | T | N | T | L | D | A | M | I | V | R | S | I | T | D | L | A | K | A | K | S | L | S | V | V | A | E | F | . |
V | E | T |
| Query Conservation | |
| | | | |
| | | | . |
| | | | |
|
|
|
|
| |
| | |
| | | |
| | | | | . | |
| |
|
|
|
| | | |
| | | | | | | | | | | | | | | |
| | | |
| | | | | | | |
|
|
|
| . |
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| Template Conservation | |
| | | | |
| | | | | |
|
|
|
| |
|
| | | | | | | | | | | |
| | | | | |
| |
| | |
| | | | |
|
|
| | | . | . | . | . | . | . | . | | | | | | | |
| | | |
|
| | | | | | | | | | |
| Template Sequence | |
D | A | M | A | H | I | R | S | K | T | D | L | P | L | M | I | D | E | G | L | K | S | S | R | E | M | R | Q | I | I | K | L | E | A | A | D | K | V | N | I | K | L | M | K | C | G | G | I | Y | P | . |
. |
. |
. |
. |
. |
. |
A | V | K | L | A | H | Q | A | E | M | A | G | I | E | C | Q | V | G | S | M | V | E | S |
| Template Known Secondary structure | |
| | | | | | | | T |
|
| S |
| | | | S | T | T |
|
| S | | | | | | | | | | | T |
|
| S | | | | |
| | | | | T | S | | | | . | . | . | . | . | . | . | | | | | | | | | | | T | T |
| | | | |
|
| S | S |
|
|
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
| | | | |
|
|
|
|
|
| | | | | | | | | |
|
|
|
|
| | | |
|
|
|
|
|
|
|
| | | | . | . | . | . | . | . | . | | | | | | | | | | |
|
|
|
| | | |
|
|
|
|
| |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
