Return to main results Retrieve Phyre Job Id

Job DescriptionP23842
Confidence28.43%DateThu Jan 5 11:39:48 GMT 2012
Rank339Aligned Residues141
% Identity5%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   556...560.........570.........580.........590.........600.........610.........620.........630... .
Predicted Secondary structure 















.
Query SS confidence 













































































.
Query Sequence  LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF. G
Query Conservation 
                    



   
            
         
  

 
                
   .
Alig confidence 















































....

























.
Template Conservation         
  

  
  
   
          
     
  
   


.... 
 
 

 
   
  
  

  

    
Template Sequence  VRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVD. . . . SIALKDMAGILTPYAAEELVSTLKKQVD
Template Known Secondary structure  T




TT

TT
S....SSS


S
Template Predicted Secondary structure 













....









Template SS confidence 















































































   126...130.........140.........150.........160.........170... ......180.........190.........200.
 
   635.... 640.........650.........660.........670.........680.........690.........700.......
Predicted Secondary structure 
...





















Query SS confidence 




. . .



































































Query Sequence  FRIAI. . . DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL
Query Conservation      
...



 
  
   
     
 



   
               
   
       





       
Alig confidence 




...



































....














...









Template Conservation 
 
  
 


 


 

 



 


  

 

 


   

  .... 
 

  
   
 

...


   
  
Template Sequence  VELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGTYGHPA. . . . TESLVATLQGTGYDT. . . GLDIAKLEQI
Template Known Secondary structure  S


TTS
TT
SB
GGG
STTS

B....TTSTT

...


Template Predicted Secondary structure 





















....




...


Template SS confidence 











































































   202.......210.........220.........230.........240..... ....250.........260 .........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions