 |
Job Description | P23842 | Confidence | 78.43% | Date | Thu Jan 5 11:39:48 GMT 2012 |
Rank | 107 | Aligned Residues | 65 |
% Identity | 15% | Template | c2e8yA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:amyx protein; |
PDBTitle: crystal structure of pullulanase type i from bacillus subtilis str.2 168
|
Resolution | 2.11 Å |
|
 |
  |   |
627 | . | . | 630 | . | . | . | . | . | . | . | . | |
|
|
|
. | 640 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | Q | L | H | K | F | G | F | R | I | A | . |
. |
. |
. |
I | D | D | F | G | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | Y | A | N | Y | E | R | L | K | R | L | Q | A | D | I | I | K | I | D | G | V | F | V | K | D | I | V | T | N | T | L | D | A | M | I | V | R | S | I | T | D | L | A | K | A | K |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
| . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |   |
Template Sequence |   |
L | A | Y | V | K | E | L | G | V | T | H | V | E | L | L | P | V | N | D | F | A | G | V | D | E | E | K | P | L | D | A | Y | N | W | G | Y | N | . |
. |
. |
. |
. |
. |
. |
. |
P | L | H | F | F | A | P | E | G | S | Y | A | S | N | P | H | D | P | Q | T | R | K | T | E | L | K | Q | M | I | N | T | L | H | Q | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| S |  |  |  |  | S |
|
|  |  |  | S | S | S |
| T | T | S | G | G | G |
|
|
|
|
|
| S | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| S | T | T | S | S |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
  |
  |   |
691 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | S | V | V | A | E | F | V |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|
|
Template Sequence |   |
G | L | R | V | I | L | D | V | V |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
329 | 330 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|