Job Description P23842 Confidence 27.96% Date Thu Jan 5 11:39:48 GMT 2012 Rank 342 Aligned Residues 71 % Identity 13% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.		.	.	.	.	.		.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure																	.						.																																																							.	.	.	.
Query SS confidence																	.						.																																																							.	.	.	.
Query Sequence		S	N	A	E	S	S	M	Y	N	I	E	Q	L	H	K	.	F	G	F	R	I	.	A	I	D	D	F	G	T	G	Y	A	N	Y	E	R	L	K	R	L	Q	A	D	I	I	K	I	D	G	V	F	V	K	D	I	V	T	N	T	L	D	A	M	I	V	R	S	I	T	D	L	A	K	A	K	S	.	.	.	.
Query Conservation																	.						.																																																							.	.	.	.
Alig confidence																	.						.						.	.	.																						.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																													.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		G	D	L	A	G	I	D	Q	K	L	G	Y	I	K	K	T	L	G	A	N	I	L	Y	L	N	P	I	.	.	.	F	K	A	P	T	N	H	K	Y	D	T	Q	D	Y	M	A	V	D	P	A	F	.	.	.	.	.	.	.	.	G	D	N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K
Template Known Secondary structure										T						T	T	T								S			.	.	.				S	S	S	S			S		S							T	T	T	.	.	.	.	.	.	.	.																S	S	S	S	S
Template Predicted Secondary structure																													.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		692	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	V	A	E	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	L	I	L	D	G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions