 |
Job Description | P23842 | Confidence | 34.02% | Date | Thu Jan 5 11:39:48 GMT 2012 |
Rank | 301 | Aligned Residues | 89 |
% Identity | 17% | Template | c1ulzA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; |
PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
|
Resolution | 2.20 Å |
|
 |
  |   |
618 | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | |
. | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | A | E | S | S | M | Y | N | I | E | Q | L | H | K | F | G | F | R | . |
I | A | I | D | D | F | G | T | G | Y | A | N | Y | E | R | L | K | R | L | Q | A | D | I | I | K | I | D | G | V | F | V | K | D | I | V | T | N | T | L | D | A | M | I | V | R | S | I | T | D | L | A | K | A | K | S | L | S | V | V | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . |   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
| . | . | . |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
Template Sequence |   |
N | R | G | E | I | A | V | R | I | I | R | A | C | K | E | L | G | I | P | T | V | A | I | Y | N | E | V | E | S | T | A | R | H | V | K | L | A | D | . |
. |
. |
E | A | Y | M | I | G | . |
. |
. |
. |
. |
. |
. |
T | D | P | L | D | T | Y | L | N | K | Q | R | I | I | N | L | A | L | E | V | G | A | D | A | I | H |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  | S | S | . | . | . |  |  |  |  |
|
| . | . | . | . | . | . | . | S | S | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
. | . | . | 50 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
697 | . | |
|
|
|
. | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | . |
. |
. |
. |
V | E | T | Q | Q | Q | Q | A | L | L | H | K | L | G | V | Q | Y | L |
Query Conservation |   |
|
| . | . | . | . |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
P | G | Y | G | F | L | A | E | N | A | E | F | A | K | M | C | E | E | A | G | I | T | F | I |
Template Known Secondary structure |   |
|
| S | S | T | T | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  | S |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|