Job Description P23842 Confidence 35.30% Date Thu Jan 5 11:39:48 GMT 2012 Rank 296 Aligned Residues 177 % Identity 10% Template c1kkoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-methylaspartate ammonia-lyase; PDBTitle: crystal structure of citrobacter amalonaticus2 methylaspartate ammonia lyase Resolution 1.33 Å

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		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.					.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure																																		.																	.	.	.	.
Query SS confidence																																		.																	.	.	.	.
Query Sequence		F	L	P	L	I	A	Q	F	N	L	S	A	R	F	D	L	Q	V	L	E	S	L	L	K	W	L	A	T	H	P	C	D	.	K	K	G	P	R	F	S	V	N	L	M	P	L	T	L	L	.	.	.	.	Q	K	N	I	A	G	R	I	I	R	L	F	K	R	Y	H	I	S	P	Q	A	V	I	L	E	I	T
Query Conservation																																		.																	.	.	.	.
Alig confidence																																		.																	.	.	.	.																			.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		I	N	N	V	E	E	K	L	G	F	K	G	E	K	L	R	E	Y	V	R	W	L	S	D	R	I	L	S	L	R	S	S	P	R	Y	H	P	T	L	H	I	D	V	Y	G	T	I	G	L	I	F	D	X	D	P	V	R	C	A	E	Y	I	A	S	L	E	K	E	A	Q	G	.	.	.	L	P	L	Y	I	E
Template Known Secondary structure											T	T	S																			S	S	T	T										T	T						T	T	T												T	T	G	G	G	T	T	.	.	.	S
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.							.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.		.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																								.
Query SS confidence																							.	.	.	.	.	.																								.
Query Sequence		E	E	Q	A	F	S	N	A	E	S	S	M	Y	N	I	E	Q	L	H	K	F	.	.	.	.	.	.	G	F	R	I	A	I	D	D	F	G	T	G	Y	A	N	Y	E	R	L	K	R	L	Q	.	A	D	I	I	K	I	D	G	V	F	V	K	D	I	V	T	N	T	L	D	A	M	I	V	R	S	I	T	D
Query Conservation																							.	.	.	.	.	.																								.
Alig confidence																							.	.	.	.	.	.																								.																	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.
Template Sequence		G	P	V	D	A	G	N	K	P	D	Q	I	R	X	L	T	A	I	T	K	E	L	T	R	L	G	S	G	V	K	I	V	A	D	E	W	C	N	T	Y	Q	D	I	V	D	F	T	D	A	G	S	C	H	X	V	Q	I	K	T	P	D	L	G	G	I	H	N	.	.	.	.	.	.	.	I	V	D	A	V	L
Template Known Secondary structure							S	S																			T									T	T			S										T	T			S						G	G	G	G	S	S	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340								.	.	.	.	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.			.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		L	A	K	A	K	S	L	S	V	V	A	E	F	.	.	V	E	T	Q	Q	Q	Q	A	L	L	H	K	L	G	V	Q	Y	L	Q	G	Y	L	I	G	R	P
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		Y	C	N	K	H	G	X	E	A	Y	Q	G	G	T	C	N	E	T	E	I	S	A	R	T	C	V	H	V	A	L	A	A	R	P	X	R	X	L	I	K	P
Template Known Secondary structure						T	T									T	T	S																		S						S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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