Return to main results Retrieve Phyre Job Id

Job DescriptionP52636
Confidence98.79%DateThu Jan 5 12:05:55 GMT 2012
Rank5Aligned Residues50
% Identity32%Templatec2fugG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250.........260.... .....270.. .......280.........290.......
Predicted Secondary structure 















.







.................






Query SS confidence 

















.







. . . . . . . . . . . . . . . . .
























Query Sequence  NAESCIDCGKCAKNCPSR. IPVDKLIQ. . . . . . . . . . . . . . . . . VRTVECTGCMTCVESCPVASTLTFS
Query Conservation 
   
  
  
   

  .
       .................    

  

 

  

   

   
Alig confidence 

















.







.................

















.





Template Conservation    
 

 

 
   

  

                        

   
  

 

  

 . 

   
Template Sequence  GLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPT. GAIVLG
Template Known Secondary structure  S
BS



T
SS



SSS
SBSSSTTT



T
SS.S

Template Predicted Secondary structure 



































.


Template SS confidence 




































































   4950.........60.........70.........80.........90.........100.........110 ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions