Return to main results Retrieve Phyre Job Id

Job DescriptionP52636
Confidence10.72%DateThu Jan 5 12:05:55 GMT 2012
Rank91Aligned Residues18
% Identity22%Templatec1v06A_
PDB info PDB header:dna-binding proteinChain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: axh domain of the transcription factor hbp1 from m.musculus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.
Predicted Secondary structure 



Query SS confidence 


















Query Sequence  LLKKAFCSWLCPVGTLSEL
Query Conservation 
 

 






 
 
 
 
Alig confidence 








.








Template Conservation 
 






. 
  
   
Template Sequence  VKNKGWSSF. YPSLTVVQH
Template Known Secondary structure  TTTS.S
Template Predicted Secondary structure 






.
Template SS confidence 


















   304.....310.. .......320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions