Return to main results Retrieve Phyre Job Id

Job DescriptionP52636
Confidence98.85%DateThu Jan 5 12:05:55 GMT 2012
Rank1Aligned Residues51
% Identity22%Templatec1gx7A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   244.....250.........260.........270.. .......280.........290.....
Predicted Secondary structure 























....






Query SS confidence 




























. . . .






















Query Sequence  IRRNAESCIDCGKCAKNCPSRIPVDKLIQ. . . . VRTVECTGCMTCVESCPVASTLT
Query Conservation 
  
   
  
  
   

  
       ....    

  

 

  

   

 
Alig confidence 




























....

















.



Template Conservation 
 

  


 
  

  

  

          
   


 

 


 

 . 

 
Template Sequence  VQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPE. NAIY
Template Known Secondary structure 
TTS

S

SGGGG
TTS

B

TTS

B


TTTS
S

SSSTTSTT.

Template Predicted Secondary structure 

























.



Template SS confidence 























































   28.30.........40.........50.........60.........70........ .80..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions