 |
Job Description | P18390 | Confidence | 3.05% | Date | Thu Jan 5 11:36:53 GMT 2012 |
Rank | 37 | Aligned Residues | 65 |
% Identity | 20% | Template | d2ldxa2 |
SCOP info | LDH C-terminal domain-like
| LDH C-terminal domain-like
| Lactate & malate dehydrogenases, C-terminal domain
|
Resolution | 2.96 |
|
 |
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | E | N | I | K | N | Q | V | L | E | K | L | G | L | N | S | E | E | Q | K | E | D | T | N | Y | L | D | G | I | Q | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | K | T | K | D | G | Q | Q | L | N | L | D | N | I | G | T | T | P | L | A | E | K | V | K | T | K | A | C | D | L | V |
Query Conservation |   |
  |
|   |
|
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |
| . | . | . |   |   |   |
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
D | S | A | R | F | R | Y | L | I | G | E | K | L | G | V | N | P | T | S | C | . |
. |
. |
H | G | W | V | L | G | E | H | G | D | S | S | V | P | I | W | S | G | V | N | V | A | G | V | T | L | K | S | L | N | P | A | I | G | T | D | K | N | K | Q | H | W | K | N | V | H | K | Q | V | V | E | G | G | Y | E | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T | S | S | . | . | . |
|
|
|  |  |  |
| S | S | S |
|  |  |  |
| G | G | G |
| B | S | S |
| S | S | S | S | B | S | T | T | T |
| S |
| S | S | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
  |   |
156 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | K | Q | G |
Query Conservation |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|
|
Template Sequence |   |
D | M | K | G |
Template Known Secondary structure |   |
 |  |  | S |
Template Predicted Secondary structure |   |
 |
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
242 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|