Return to main results Retrieve Phyre Job Id

Job DescriptionP45804
Confidence22.45%DateThu Jan 5 12:03:49 GMT 2012
Rank7Aligned Residues18
% Identity11%Templated1ig4a_
SCOP infoDNA-binding domain DNA-binding domain Methyl-CpG-binding domain, MBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   382.......390.........
Predicted Secondary structure 









Query SS confidence 

















Query Sequence  SHMARYQSGKNTSDQVTI
Query Conservation 

 


  
   
   
 
Alig confidence 

















Template Conservation   

  

   
    


Template Sequence  VELTRYLGPACDLTLFDF
Template Known Secondary structure 
SSS

TTB
T
Template Predicted Secondary structure 







Template SS confidence 

















   47..50.........60....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions