Return to main results Retrieve Phyre Job Id

Job DescriptionP45804
Confidence8.57%DateThu Jan 5 12:03:49 GMT 2012
Rank55Aligned Residues14
% Identity21%Templatec3fmyA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:hth-type transcriptional regulator mqsa PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   382.......390.....
Predicted Secondary structure 






Query SS confidence 













Query Sequence  SHMARYQSGKNTSD
Query Conservation 

 


  
   
 
Alig confidence 













Template Conservation   


  
 
     
Template Sequence  NAFSRYEKGNAPHP
Template Known Secondary structure  TTT



Template Predicted Secondary structure 





Template SS confidence 













   97..100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions