Return to main results Retrieve Phyre Job Id

Job DescriptionP45804
Confidence58.43%DateThu Jan 5 12:03:49 GMT 2012
Rank4Aligned Residues79
% Identity16%Templatec3fcsA_
PDB info PDB header:cell adhesion/blood clottingChain: A: PDB Molecule:integrin, alpha 2b; PDBTitle: structure of complete ectodomain of integrin aiibb3
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   486...490.........500.........510 .........520.........530.........540.........550.........560..
Predicted Secondary structure 













...




























Query SS confidence 
























. . .



















































Query Sequence  DACVLVEQDLNSDGQAERILFAFND. . . DRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLV
Query Conservation    
     

  

  



     ...              
                    
  
          

 
Alig confidence 
























...



















































Template Conservation 
 


  



 

  

 



       
 



 
   
      
 
         

 



  
 
 

 


 
Template Sequence  GSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSAFGFSLRGAVDIDDNGYPDLI
Template Known Secondary structure  TS
SS
SSS
TT
STTSS

TT
SS
S

S
TT

TTSS
SSSSSS
Template Predicted Secondary structure 

















































Template SS confidence 















































































   357..360.........370.........380.........390.........400.........410.........420.........430......
 
   563.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  VD
Query Conservation 

Alig confidence 

Template Conservation 

Template Sequence  VG
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   437.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions