Job Description P45804 Confidence 7.02% Date Thu Jan 5 12:03:49 GMT 2012 Rank 94 Aligned Residues 87 % Identity 13% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		L	I	A	T	G	L	L	P	L	V	S	L	L	T	L	M	F	I	I	T	.	.	L	P	F	T	G	L	S	A	I	S	R	H	I	S	A	A	G	L	L	L	T	L	A	F	L	Q	L	I	L	M	A	I	V	R	D	P	Q	K	A	S	L	P	W	T	G	P	L	R	C	L	I	K	T	A	L	L	V	A
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		N	V	T	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	P	Y	M	T	Y	T	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I	E	V	T	V	Q	H	Y	L	K	V	E	S	Q	P	A	R	A	A	S	I	T	R	A	S	R	I	A	F	P	V	V	F
Template Known Secondary structure																							T	S				S	S																															T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		294	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Y	V	F	V	A	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	N	I	I	L	A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions