Return to main results Retrieve Phyre Job Id

Job DescriptionP45804
Confidence10.54%DateThu Jan 5 12:03:49 GMT 2012
Rank35Aligned Residues51
% Identity24%Templatec1l5gA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha v; PDBTitle: crystal structure of the extracellular segment of integrin avb3 in2 complex with an arg-gly-asp ligand
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   486...490.........500.........510. ........520.........530......
Predicted Secondary structure 














...














Query SS confidence 

























. . .
























Query Sequence  DACVLVEQDLNSDGQAERILFAFNDD. . . RVIVYGFDSDRKEWDALDMSLLPNE
Query Conservation    
     

  

  



      ...             
           
Alig confidence 

























...
























Template Conservation 
 


  



 

  






       
 


  
   
      
 
   
Template Sequence  GSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQ
Template Known Secondary structure  GG
S
TT
SSS

TT
SGGG

TT

Template Predicted Secondary structure 































Template SS confidence 





















































   341........350.........360.........370.........380.........390....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions