Return to main results Retrieve Phyre Job Id

Job DescriptionP23481
Confidence24.60%DateThu Jan 5 11:39:27 GMT 2012
Rank65Aligned Residues64
% Identity27%Templatec2a91A_
PDB info PDB header:signaling protein,transferase,membrane pChain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: crystal structure of erbb2 domains 1-3
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50..... ....60.........70.........80..... ....90.........100.........110.........120.
Predicted Secondary structure 




....





















..


























Query SS confidence 







. . . .





























. .



































Query Sequence  PVVCHHCE. . . . EAPCLQVCPVNAISQRDDAIQLNESLCIGC. . KLCAVVCPFGAISASGSRPVNAHAQYVFQAEGSLKD
Query Conservation     
  
 ....   

 


  

        

   



..  
  


 


                        
Alig confidence 







....





























..
















...................
Template Conservation     
 

        

  

   
       
             
   

  
      ...................
Template Sequence  HSDCLACLHFNHSGICELHCPALVTYNTDTFESMPNPEGRYTFGASCVTACPYNYLSTDVG. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSSSTTSS


S
TTT


TT

TTSS

TT

TTS...................
Template Predicted Secondary structure 













































...................
Template SS confidence 















































































   228.230.........240.........250.........260.........270.........280........
 
   122.......130.........140.........150.........160.....
Predicted Secondary structure 


































Query SS confidence 











































Query Sequence  GEENAPTQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQ
Query Conservation                         

  
  
   



 



 
Alig confidence  ...................................








Template Conservation  ................................... 

  

 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SCTLVCPLH
Template Known Secondary structure  ...................................BSS

TT
Template Predicted Secondary structure  ...................................





Template SS confidence 











































   289290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions