Job Description P0A6P7 Confidence 99.49% Date Thu Jan 5 11:03:39 GMT 2012 Rank 213 Aligned Residues 166 % Identity 15% Template c3tr5C_ PDB info PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii Resolution 2.11 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	K	T	P	G	R	T	Q	L	I	N	L	F	E	V	A	D	G	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																			.	.	.	.	.	.	.	.	.
Template Conservation																																																						.																			.	.	.	.	.	.	.	.	.
Template Sequence		T	F	A	I	I	S	H	P	D	A	G	K	T	T	L	T	E	K	L	L	L	F	G	G	A	I	Q	L	A	G	T	I	K	S	R	H	A	T	S	D	W	X	E	L	E	K	Q	V	T	T	S	V	.	X	Q	F	P	Y	K	D	Y	L	I	N	L	L	D	T	P	G	H	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	S													T									T												T	T				S	S		.						T	T											S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		K	R	K	W	Q	R	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence		.	.	.	.																																																																							.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	D	F	T	E	D	T	Y	R	T	L	T	A	V	D	S	A	L	X	V	I	D	A	A	K	G	V	E	P	R	T	I	K	L	X	E	V	C	R	L	R	H	T	P	I	X	T	F	I	N	K	X	D	R	D	T	R	P	S	I	E	L	L	D	E	I	E	S	I	L	R	I	H	C	A	P
Template Known Secondary structure		.	.	.	.	T	T									G	G	G		S								T	T	T	B	S													T	T	T										T	T	S																S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																																																																					166	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	F	N	G	D	V	Q	V	E	T	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	W	P	I	G	X	G	K	Y	F	K	G	I	Y	H	L	I	E	D	A	I	Y	L	Y	Q	P	S	E	R	I	E	G	I	N	N	P	E	L	D	K	K	L	G	D	L	A	S	E	L	R	N	E	I	E	L	V	K	G	A	S	H	P	F	E	R	E	G	Y	L	K	G	E	L	T	P	I	F	F	G
Template Known Secondary structure		S					S		T	T								T	T	T	T														T	T									T																	S											T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E	M	Q	P	V	E	E	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	I	N	N	F	G	V	G	E	L	L	D	A	F	V	K	E	A	P	P	P	Q	G	R	E	T	N	S
Template Known Secondary structure		B	G	G	G	T	B	S												S								B	S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions