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Job DescriptionP0A6P7
Confidence99.53%DateThu Jan 5 11:03:39 GMT 2012
Rank199Aligned Residues174
% Identity17%Templatec3r7wC_
PDB info PDB header:protein transportChain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex
Resolution2.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40......... 50.........60.........70.........80.........90.........100
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Query Sequence  DTGIEVAFAGRSNAGKSSALNTLTNQ. . . KSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALG
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Template Sequence  PLGSKLLLXGRSGSGKSSXRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNXTLNLWDCGG. . . . . . . . QDVFXENYFTK
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   4.....10.........20.........30.........40.........50.........60.... .....70.....
 
   101........110.........120.........130...... ...140.........150.........160...... ...
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Query Sequence  EYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDS. . . . . . NIAVLVLLTKADKLASGARKAQLNMVREAV. . . . . LAF
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Template Sequence  QKDHIFQXVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHKXDLVQLDKREELFQIXXKNLSETSSEFG
Template Known Secondary structure  TTTTT
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   170.........180.........190.........200.....
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Query Sequence  NGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEE
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Template Sequence  FPNLIGFPTSIWDESLYKAWSQIVCSLIPNXSNHQS
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   156...160.........170.........180.........190.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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