Job Description P0A6P7 Confidence 99.67% Date Thu Jan 5 11:03:39 GMT 2012 Rank 83 Aligned Residues 169 % Identity 14% Template c3nxsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp Resolution 2.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		T	G	I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	T	S	K	T	P	G	R	T	Q	L	I	N	.	.	.	L	F	E	V	A	D	G	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E
Query Conservation																																												.	.	.
Alig confidence																										.																		.	.	.
Template Conservation																										.
Template Sequence		S	A	M	H	V	G	I	T	G	V	P	G	V	G	K	S	T	T	I	E	A	L	G	M	.	H	L	I	E	A	G	H	R	V	A	V	L	A	V	D	R	M	A	R	L	A	V	H	P	D	A	Y	I	R	P	S	P	T	S	G	T	L	G	G	V	A	K	A	T	R	E	T	I	V	L	L	E	A	A	G
Template Known Secondary structure			S									T	T	S												.					T	T																		T	T										S																			T	T
Template Predicted Secondary structure																										.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		102															.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		Y	D	V	I	L	V	E	T	V	G	V	G	Q	S	E	V	T	V	A	G	M	V	D	T	F	V	F	L	T	L	A	R	T	G	D	Q	L	Q	G	I	K	.	.	.	.	K	G	V	L	E	L	A	D	V	I	V	V	N	K	A	D	G	E	H	A	V	E	A	K	A	A	A	R	E	L	S	G	A	I	R
Template Known Secondary structure													T	T							T	T		S									S	S	S	S							.	.	.	.	T	T		G	G	G		S									G	G	G
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		168	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		A	F	N	G	.	.	.	.	.	D	V	Q	V	E	T	F	S	S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.
Template Conservation
Template Sequence		L	I	Y	P	R	E	S	L	W	R	P	P	V	L	T	M	S	A	V	E	G	T	G	L	P	E	L	W	E	T	V	L	R	H	R	E
Template Known Secondary structure				S		T	T		S										T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions