Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6P7
Confidence99.21%DateThu Jan 5 11:03:39 GMT 2012
Rank245Aligned Residues166
% Identity11%Templatec3l82B_
PDB info PDB header:cell cycleChain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.... .....60.........70.. .......80.........90
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Query Sequence  IRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLAR. . . . . . TSKTPGRTQLINLFEVAD. GKRLVDLPGYGYAEVPEE
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Template Sequence  LHSLIIQNEPRFAXFGPGLEELNTSLVLSLXSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYS. . . . . . . . .
Template Known Secondary structure  SS








GGGTSSSS
T

SS



GGG

TTS


SSSS

S
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   168.170.........180.........190.........200.........210.........220.........230........
 
   91........100.........110.........120.........130..... ....140..... ....150.........160....
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Query Sequence  MKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVD. . . . . SNIAVLVLLT. KADKLASGARKAQLNMVRE
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Template Sequence  . . . . . TPQIQKVCEVVDGFIYVANAEAHKRHEWQDEFSHIXAXTDPAFGSSGRPLLVLSCISQGDVKRXPCFYLAHELHL
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S
BTT



S
TTSS
S
S
SSTTS
B

TTG
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   239240.........250.........260.........270.........280.........290.........300.........310...
 
   165....170.........180.........190.........
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Query Sequence  AVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSE
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Template Sequence  NLL. . NHPWLVQDTEAETLTGFLNGIEWILEEVES
Template Known Secondary structure  GGG..
S
TTT
TTTTTTTT
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   351.. ......360.........370.........380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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