Job Description P0A6P7 Confidence 98.89% Date Thu Jan 5 11:03:39 GMT 2012 Rank 254 Aligned Residues 166 % Identity 12% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																					.	.	.	.	.																			.	.	.	.
Query SS confidence																		.																					.	.	.	.	.																			.	.	.	.
Query Sequence		H	L	P	S	D	T	G	I	E	V	A	F	A	G	R	S	.	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	T	.	.	.	.	.	S	K	T	P	G	R	T	Q	L	I	N	L	F	E	V	A	D	G	.	.	.	.	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E
Query Conservation																		.																					.	.	.	.	.																			.	.	.	.
Alig confidence																		.																					.	.	.	.	.																			.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Y	L	I	I	Q	N	E	P	R	F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R	.	.	.	.	.	.	.	.
Template Known Secondary structure		T														T					S	S	S							T	T		G	G	G							S	T	T	T		S	S	S									T	T	T									S					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																												.	.	.	.	.															.
Query SS confidence																																												.	.	.	.	.															.
Query Sequence		E	M	K	R	K	W	Q	R	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	.	.	.	.	.	W	A	V	D	S	N	I	A	V	L	V	L	L	T	.	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R
Query Conservation																																												.	.	.	.	.															.
Alig confidence		.	.																																									.	.	.	.	.															.
Template Conservation		.	.
Template Sequence		.	.	R	Y	S	V	I	P	Q	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	M	P	C	F	Y	L	A	H	E	L	H
Template Known Secondary structure		.	.																S							B		B	T	T																							T	T										S	S	T	T	S		B										T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	V	L	A	F	N	G	D	V	Q	V	E	T	F	S	S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		L	N	L	L	.	.	N	H	P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V
Template Known Secondary structure		G	G	G	G	.	.		S									T	T	T		T	T												S
Template Predicted Secondary structure						.	.
Template SS confidence
		350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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