Job Description P0A6P7 Confidence 99.81% Date Thu Jan 5 11:03:39 GMT 2012 Rank 19 Aligned Residues 173 % Identity 16% Template c3izyP_ PDB info PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 Resolution 10.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		D	T	G	I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	T	S	K	.	.	T	P	G	R	T	Q	L	I	N	L	F	E	V	A	D	G	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E
Query Conservation																																				.	.
Alig confidence																																				.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	S	P	V	V	T	I	M	G	H	V	D	H	G	K	T	T	L	L	D	K	L	R	K	T	Q	V	A	A	M	E	A	G	G	I	T	Q	H	I	G	A	F	L	V	S	L	P	S	G	E	K	I	T	F	L	D	T	P	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	S	A	M
Template Known Secondary structure						B						S	T	T	T	T																S	S	S			B				T	T	S			B		S	S		S	S			B					S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.														.	240	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A	D	K	L	.	.	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	G	D	V	Q	V	E	T	F	S
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		R	A	R	G	T	Q	V	T	D	I	V	I	L	V	V	A	A	D	D	G	V	M	K	Q	T	V	E	S	I	Q	H	A	K	D	A	H	V	P	I	V	L	A	I	N	K	C	D	K	A	E	A	D	P	E	K	V	K	K	E	L	L	A	Y	D	V	V	C	E	D	Y	G	G	D	V	Q	A	V	H	V	S
Template Known Secondary structure		B	B	S	S	S	B	S	B	S	S						B	S	S	S															T	T	T								B	S	G	G	G	T	T	T	S			S	S	S	S					T	T	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E	M	Q	P	V	E	E	T	Q	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	G	E	N	M	M	A	L	A	E	A	T	I	A	L	A	E	M	L	E	L	K	A	D	P	T	G	A
Template Known Secondary structure		S	S	S	S		S	S												T	T							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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