Job Description P0A6P7 Confidence 99.72% Date Thu Jan 5 11:03:39 GMT 2012 Rank 44 Aligned Residues 170 % Identity 13% Template c3c5hA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the ras homolog domain of human grlf12 (p190rhogap) Resolution 1.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60										.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.												.	.	.													.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.												.	.	.													.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		T	G	I	E	V	A	F	A	G	R	S	N	A	.	.	.	.	.	.	.	.	.	G	K	S	S	A	L	N	T	L	T	N	.	.	.	Q	K	S	L	A	R	T	S	K	T	P	G	.	.	.	.	.	.	.	.	.	R	T	Q	L	I	N	L	F	E	V	A	D	G	K	R	L	V	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.												.	.	.													.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.												.	.	.													.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	Y	N	I	S	V	V	G	L	S	G	T	E	K	E	K	G	Q	C	G	I	G	K	S	C	L	C	N	R	F	V	R	P	S	A	D	E	F	H	L	D	H	T	S	V	L	S	T	S	D	F	G	G	R	V	V	N	N	D	H	F	L	Y	W	G	E	V	S	K	M	H	I	V	E	Q	T	E	F	I
Template Known Secondary structure		S									S				T	T	T	T	T	T				S												S	T	T	T			S												T	S	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																												.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M
Query Conservation		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	Q	T	F	Q	P	H	R	S	T	A	L	Q	P	Y	I	K	R	A	A	A	T	K	L	A	S	A	E	K	L	M	Y	F	C	T	D	Q	L	G	L	E	Q	D	F	E	Q	K	Q	M	P	D	G	K	L	L	V	D	G	F	L	L	G	I	D	V	S	R	N	F	D	D	Q	L	K	F	V	S	N	L
Template Known Secondary structure			T	T	T		S	B	T	T	G	G	G									T		S					T	T		B					G	G	G	T	T		G	G	G	S				B		G	G	G														B
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	G	D	V	Q	V	E	T	F	S	S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E
Query Conservation
Alig confidence																																							.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		Y	N	Q	L	A	K	T	K	K	P	I	V	V	V	L	T	K	C	D	E	G	V	E	R	Y	I	R	D	A	H	T	F	A	L	S	K	K	.	.	.	.	.	N	L	Q	V	V	E	T	S	A	R	S	N	V	N	V	D	L	A	F	S	T	L	V	Q	L	I	D	K
Template Known Secondary structure								T	T										G	G	G	B														T	S	S	.	.	.	.	.	S							B	T	T	T	T	B	S
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions