 |
Job Description | P0A6P7 | Confidence | 99.03% | Date | Thu Jan 5 11:03:39 GMT 2012 |
Rank | 248 | Aligned Residues | 129 |
% Identity | 17% | Template | c3b8hA_ |
PDB info |
PDB header:biosynthetic protein/transferase | Chain: A: PDB Molecule:elongation factor 2; |
PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex
|
Resolution | 2.50 Å |
|
 |
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | G | I | E | V | A | F | A | G | R | S | N | A | G | K | S | S | A | L | N | T | L | T | N | Q | K | S | L | A | R | T | S | K | T | P | G | R | T | Q | L | I | N | L | F | E | V | A | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | R | L | V | D | L | P | G | Y | G | Y | A | E | V | P |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Sequence |   |
T | N | V | R | N | M | S | V | I | A | H | V | D | H | G | K | S | T | L | T | D | S | L | V | Q | R | A | G | I | I | S | A | G | I | T | I | K | S | T | A | I | S | L | Y | S | E | M | S | D | E | D | V | K | E | I | K | Q | K | T | D | G | N | S | F | L | I | N | L | I | D | S | P | G | H | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |  | B |
|  |  |
|
|
|
| B |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| S | S |
|
|
| S | S |  |  |  |  |  |  |  |
|
|
| S | S | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | M | K | R | K | W | Q | R | A | L | G | E | Y | L | E | K | R | Q | S | L | Q | G | L | V | V | L | M | D | I | R | H | P | L | K | D | L | D | Q | Q | M | I | E | W | A | V | D | S | N | I | A | V | L | V | L | L | T | K | A | D | K | L | A | S | G | A | R | K | A | Q | L | N | M | V | R | E | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
V | D | F | S | S | E | V | T | A | A | L | R | V | T | D | G | A | L | V | V | V | D | T | I | E | G | V | C | V | Q | T | E | T | V | L | R | Q | A | L | G | E | R | I | K | P | V | V | V | I | N | K | V | D | R | A | L | L | E | L | Q | V | S | K | E | D | L | Y | Q | T | F |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  | T | T | T | B | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|