Job Description P0A6P7 Confidence 97.94% Date Thu Jan 5 11:03:39 GMT 2012 Rank 271 Aligned Residues 107 % Identity 8% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		G	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	.	.	.	.	I	A	V	L	V	L	L	T	K	A	D
Query Conservation																																																																			.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	F	L	L	D	T	A	G	.	.	.	.	.	.	.	.	.	.	S	D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K	S	A	R	P	D	R	E	R	P	L	R	A	V	L	V	A	N	K	T	Q
Template Known Secondary structure								T	T	T	.	.	.	.	.	.	.	.	.	.	T								S	T	T													T	T																				S		T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.											.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	G	D	V	Q	V	E	T	F	S	S	L	K	K	.	.	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E
Query Conservation																																					.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	L	D	M	A	Q	D	W	A	T	T	N	.	.	.	.	.	.	.	.	.	.	T	L	D	F	F	D	V	S	A	A	D	A	P	F	L	S	I	A	T	T	F	Y	R	N	Y	E	D	K	V	A
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions