Job Description P0A6P7 Confidence 99.74% Date Thu Jan 5 11:03:39 GMT 2012 Rank 40 Aligned Residues 152 % Identity 17% Template c2wwwB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein Resolution 2.64 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																											.	.	.	.	.																	.	.										.	.	.
Query SS confidence																											.	.	.	.	.																	.	.										.	.	.
Query Sequence		D	T	G	I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	.	.	.	.	.	Q	K	S	L	A	R	T	S	K	T	P	G	R	T	Q	L	.	.	I	N	L	F	E	V	A	D	G	.	.	.	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R
Query Conservation																											.	.	.	.	.																	.	.										.	.	.
Alig confidence																											.	.	.	.	.																	.	.										.	.	.															.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		P	L	A	F	R	V	G	L	S	G	P	P	G	A	G	K	S	T	F	I	E	Y	F	G	K	M	L	T	E	R	G	H	K	L	S	V	L	A	V	D	T	E	L	S	R	D	M	N	A	Y	I	R	P	T	R	T	T	N	E	A	I	L	L	C	E	G	A	G	Y	D	I	I	L	I	.	.	.	.	.	.
Template Known Secondary structure			S	S									T	T	S	S															T	T												S	S	S		T	T							T	T											T	T		S					.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		K	W	Q	R	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	.	.	.	.	.	A
Query Conservation																																																																												.	.	.	.	.
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	T	V	G	Q	S	E	F	A	V	A	D	M	V	D	M	F	V	L	L	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	E	M	A	D	L	V	A	V	T	K	S	D	G	D	L	I	V	P	A	R	R	I	Q	A	E	Y	V	S	A	L	K	L	L	R	K	R	S
Template Known Secondary structure		.	.												T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S		S								S	T	T	S	S															T	T	S			S
Template Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	G	D	V	Q	V	E	T	F	S	S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	W	K	P	K	V	I	R	I	S	A	R	S	G	E	G	I	S	E	M	W	D	K	M	K	D	F	Q	D	L
Template Known Secondary structure		S	S										T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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