Job Description P0A6P7 Confidence 99.48% Date Thu Jan 5 11:03:39 GMT 2012 Rank 214 Aligned Residues 163 % Identity 19% Template c2qptA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:eh domain-containing protein-2; PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling Resolution 3.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	P	D	I	R	H	L	P	S	D	T	G	I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	.	A	R	T	S	K	T	P	G	R	T	Q	L	I	N	L	F	E	V	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	P	A	L	E	D	A	D	F	D	G	K	P	M	V	L	V	A	G	Q	Y	S	T	G	K	T	S	F	I	Q	Y	L	L	E	Q	E	V	P	G	S	R	V	G	P	E	P	T	T	D	C	F	V	A	V	M	H	G	E	T	E	G	T	V	P	G	N	T	F	L	N	R	F	M	C	A	Q	L	P	N
Template Known Secondary structure		T						S	T	T	T	S	S									B	T	T	S											T	S			S	S					S	S					S								S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
							74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																.
Query SS confidence		.	.	.	.	.																																																.
Query Sequence		.	.	.	.	.	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	.	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A
Query Conservation		.	.	.	.	.																																																.
Alig confidence		.	.	.	.	.																.	.	.	.	.	.	.	.	.																								.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	L	E	S	I	S	I	I	D	T	P	G	I	L	S	R	G	Y	D	.	.	.	.	.	.	.	.	.	F	P	A	V	L	R	W	F	A	E	R	V	D	L	I	I	L	L	F	D	A	H	K	L	E	I	S	D	E	F	S	E	A	I	G	A	L	R	G	H	E	D	K	I	R	V	V	L	N	K	A
Template Known Secondary structure															B					S		.	.	.	.	.	.	.	.	.													S								T	T	S														T	T	T		G	G	G								G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	G	D	.	.	V	Q	V	E	T	F	S	S	L	K	K	Q	G
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		D	M	V	E	T	Q	Q	L	M	R	V	Y	G	A	L	M	W	A	L	G	K	V	V	G	T	P	E	V	L	R	V	Y	I	G	S	F	W	S	Q	P
Template Known Secondary structure		G	G	S																							S	S							S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions