Job Description P0A6P7 Confidence 99.62% Date Thu Jan 5 11:03:39 GMT 2012 Rank 147 Aligned Residues 161 % Identity 14% Template c2il1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:rab12; PDBTitle: crystal structure of a predicted human gtpase in complex with gdp Resolution 2.10 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	D	T	G	I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	T	S	K	T	P	G	R	T	Q	L	I	N	L	F	E	V	A	D	G	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E
Query Conservation
Alig confidence																																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	D	F	K	L	Q	V	I	I	I	G	S	R	G	V	G	K	T	S	L	M	E	R	F	T	D	S	T	V	G	V	D	F	K	I	K	.	.	.	.	.	T	V	E	L	R	G	K	K	I	R	L	Q	I	W	D	T	A	G	.	.	.	.	.	.	.	.	.	.	Q	E	R	F	N	S	I	T	S	A
Template Known Secondary structure				S										S	T	T	S	S													T	T							.	.	.	.	.					T	T													.	.	.	.	.	.	.	.	.	.	S	G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.											.	190	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	G	D	V	Q	V	E	T	F	S	S	L
Query Conservation
Alig confidence																																																																.	.
Template Conservation																																																																.	.
Template Sequence		Y	Y	R	S	A	K	G	I	I	L	V	Y	D	I	T	K	K	E	T	F	D	D	L	P	K	W	M	K	M	I	D	K	Y	A	S	E	D	A	E	L	L	L	V	G	N	K	L	D	C	E	T	D	R	E	I	T	R	Q	Q	G	E	K	.	.	F	A	Q	Q	I	T	G	M	R	F	C	E	A	S	A	K
Template Known Secondary structure							S								T	T							T												S		T	T										G	G	G	G	G	G			S								.	.				T	S	T	T							B	T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	F	N	V	D	E	I	F	L	K	L	V	D	D	I	L	K
Template Known Secondary structure		T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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