Job Description P0A6P7 Confidence 99.59% Date Thu Jan 5 11:03:39 GMT 2012 Rank 164 Aligned Residues 157 % Identity 18% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	T	S	K	T	P	G	R	T	Q	L	I	N	L	F	E	V	A	D	G	K	R	L	V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E	Y	L	E	K	R
Query Conservation
Alig confidence																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	K	K	G	T	S	S	D	I	T	.	.	.	.	.	.	.	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	T	L	K	S	L	I	T	A	L
Template Known Secondary structure									S	T	T	S	S							T	T	S						S	S	S		.	.	.	.	.	.	.						S	S	S	S								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50														.	.	.	.	.	.	.	.	.	60	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																			.																																.														.
Query SS confidence																																			.																																.														.
Query Sequence		Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	.	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A	R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	.	G	D	V	Q	V	E	T	F	S	S	L	K	K	.
Query Conservation																																			.																																.														.
Alig confidence														.																					.																																.														.
Template Conservation														.
Template Sequence		N	I	S	D	I	A	V	L	C	I	P	P	.	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K	S	A
Template Known Secondary structure			T		S								T	.	T																T	T											G	G	G	S																T	T	T	S	T	T	T	T										T	T	S
Template Predicted Secondary structure														.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
						184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E	M	Q	P	V	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		K	N	P	F	E	G	V	D	E	L	K	A	R	I	N	E	V	A	E	K	I	E	A	E	N
Template Known Secondary structure		S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions