Job Description P0A6P7 Confidence 99.85% Date Thu Jan 5 11:03:39 GMT 2012 Rank 15 Aligned Residues 171 % Identity 13% Template c1kk3A_ PDB info PDB header:translation Chain: A: PDB Molecule:eif2gamma; PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+ Resolution 1.90 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																											.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	T	G	I	E	V	A	F	A	G	R	S	N	A	G	K	S	S	A	L	N	T	L	T	N	Q	K	S	L	A	R	T	S	K	T	P	G	R	T	Q	L	I	N	L	F	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	G	K	R	L
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		R	Q	A	E	V	N	I	G	M	V	G	H	V	D	H	G	K	T	T	L	T	K	A	L	T	G	V	W	T	.	D	S	E	E	L	R	R	G	I	T	I	K	I	G	F	A	D	A	E	I	R	R	C	P	N	C	G	R	Y	S	T	S	P	V	C	P	Y	C	G	H	E	T	E	F	V	R	R	V	S	F
Template Known Secondary structure			S									S	S	T	T	S	S										T				.				T	T	S	S		S	S	S													T	T	T					S	S	S	B		T	T	T			B
Template Predicted Secondary structure																															.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																.																		.
Query SS confidence																																																.																		.
Query Sequence		V	D	L	P	G	Y	G	Y	A	E	V	P	E	E	M	K	R	K	W	Q	R	A	L	G	E	Y	L	E	K	R	Q	S	L	Q	G	L	V	V	L	M	D	I	R	H	P	L	.	K	D	L	D	Q	Q	M	I	E	W	A	V	D	S	N	I	A	.	V	L	V	L	L	T	K	A	D	K	L	A	S	G	A
Query Conservation																																																.																		.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																													.																		.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	A	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	A	L	M	T	T	M	L	A	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	R	P	Q	T	R	E	H	L	M	A	L	Q	I	I	G	Q	K	N	I	I	I	A	Q	N	K	I	E	L	V	D	K	E	K
Template Known Secondary structure					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G		S								T	T	S		S																T											G	G	G	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.														.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		R	K	A	Q	L	N	M	V	R	E	A	V	L	A	F	N	.	G	D	V	Q	V	E	T	F	S	S	L	K	K	Q	G	V	D	K	L	R	Q	K	L	D	T	W	F	S	E	M	Q	P	V	E	E	T	Q
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		A	L	E	N	Y	R	Q	I	K	E	F	I	E	G	T	V	A	E	N	A	P	I	I	P	I	S	A	L	H	G	A	N	I	D	V	L	V	K	A	I	E	D	F	I	P	T	P	K	R	D	P	N	K	P
Template Known Secondary structure														T	T	S	T	T	T	T							B	T	T	T	T	B	T												S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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