Job Description P0C8K0 Confidence 43.05% Date Thu Jan 5 11:30:07 GMT 2012 Rank 73 Aligned Residues 160 % Identity 19% Template d1m6ja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Y	A	V	C	S	A	H	P	L	V	L	E	A	A	I	R	Y	A	S	A	N	Q	T	P	L	L	I	E	A	T	S	N	Q	V	D	Q	F	.	G	G	Y	T	G	M	T	P	A	D	F	R	G	F	V	C	Q	L	A	D	S	L	N	F	P	Q	D	A	L	I	L	G	G	D	H	L	G	P	N	R	W	Q
Query Conservation																																							.
Alig confidence																																		.					.																																				.	.	.	.	.	.	.
Template Conservation																																		.																																									.	.	.	.	.	.	.
Template Sequence		V	I	V	G	V	P	F	I	Y	I	P	K	V	Q	Q	I	L	A	G	E	A	N	G	A	N	I	L	V	S	A	E	N	.	A	W	T	K	S	G	A	Y	T	G	E	V	H	V	G	M	L	V	D	C	Q	V	P	Y	V	I	L	G	H	S	E	R	R	Q	I	F	H	E	S	N	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G										T	S	T	T	G	G	G						S		.		B	S	S	S	S	S		T	T			B							T	T							S								S					.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																																									.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		N	L	P	A	A	Q	A	M	A	N	A	D	D	L	I	K	S	Y	V	A	A	G	F	K	K	I	H	L	D	C	S	M	S	C	Q	D	D	P	I	P	L	T	D	D	I	V	A	E	R	A	A	R	L	A	K	V	A	E	E	T	C	L	E	H	F	G	E	A	.	D	L	E	Y	V	I	G	T	E	V	P
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.	.	.																	.																																												.										.	.
Template Conservation		.	.	.	.	.	.	.	.																	.																																																						.	.
Template Sequence		.	.	.	.	.	.	.	.	E	Q	V	A	E	K	V	K	V	A	I	D	A	G	L	K	.	V	I	A	C	I	G	E	T	E	A	Q	R	I	A	N	Q	T	E	E	V	V	A	A	Q	L	K	A	I	N	N	A	I	S	K	E	A	W	K	N	I	I	L	A	Y	E	P	V	W	A	I	G	T	G	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.														T			.														T	T																	S		T	G	G	G	G	G								G	G	G	S	S	S	S	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																	.																																																						.	.
Template SS confidence
										114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	G	A	H	E	T	L	S	E	L	A	V	T	T	P	D	A	A	R	A	T	L	E	A	H	R	H	A	F	E	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	K	T	A	T	P	D	Q	A	Q	E	V	H	Q	Y	I	R	K	W	M	T	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions