Job Description P0C8K0 Confidence 28.07% Date Thu Jan 5 11:30:07 GMT 2012 Rank 105 Aligned Residues 241 % Identity 13% Template c3ih1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:methylisocitrate lyase; PDBTitle: crystal structure of carboxyvinyl-carboxyphosphonate phosphorylmutase2 from bacillus anthracis Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		T	E	M	V	R	Q	H	K	A	G	K	T	N	G	I	Y	A	V	C	S	A	H	P	L	V	L	E	A	A	I	R	Y	A	S	A	N	Q	T	P	L	L	I	E	A	T	S	N	Q	V	D	Q	F	G	G	Y	T	.	.	.	G	M	T	P	A	D	F	R	G	F	V	C	Q	L	A	D	S	L	N	F	P
Query Conservation																																																										.	.	.
Alig confidence																							.	.	.	.	.	.																										.				.	.	.
Template Conservation																							.	.	.	.	.	.																										.
Template Sequence		N	R	F	R	A	L	V	E	A	N	E	I	L	Q	I	P	G	A	H	D	A	.	.	.	.	.	.	X	A	A	L	V	A	R	N	T	G	F	L	A	L	Y	L	S	G	A	A	Y	T	A	S	K	.	G	L	P	D	L	G	I	V	T	S	T	E	V	A	E	R	A	R	D	L	V	R	A	T	D	L	P
Template Known Secondary structure										S	S	S						B		S	S		.	.	.	.	.	.									T	T		S														.	T			S	S	S		S
Template Predicted Secondary structure																							.	.	.	.	.	.																										.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		Q	D	A	L	I	L	G	G	D	H	L	G	P	N	R	W	Q	N	L	P	A	A	Q	A	M	A	N	A	D	D	L	I	K	S	Y	V	A	A	G	F	K	K	I	H	L	D	C	S	M	S	C	Q	D	D	P	I	P	L	T	D	D	I	V	.	A	E	R	A	A	R	L	A	K	V	A	E	E	T	C	L
Query Conservation																																																																	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.																																							.															.	.
Template Conservation		.	.	.													.	.	.	.	.	.	.	.	.	.																																																						.	.
Template Sequence		.	.	.	V	L	V	D	I	D	T	G	F	G	G	V	.	.	.	.	.	.	.	.	.	.	L	N	V	A	R	T	A	V	E	X	V	E	A	K	V	A	A	V	Q	I	E	D	Q	Q	L	P	K	K	C	G	H	L	N	G	K	K	L	V	T	T	E	E	L	V	Q	K	I	K	A	I	K	E	V	.	.
Template Known Secondary structure		.	.	.						T	T		S	S	S		.	.	.	.	.	.	.	.	.	.													T	T		S							B		S	S			T	T		T	T				B																	.	.
Template Predicted Secondary structure		.	.	.													.	.	.	.	.	.	.	.	.	.																																																						.	.
Template SS confidence
					89	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	F	G	E	A	D	L	E	Y	V	I	G	T	E	V	P	V	P	G	G	A	H	E	T	L	S	E	L	A	V	T	T	P	D	A	A	R	A	T	L	E	A	H	R	H	A	F	E	K	Q	G	L	N	A	I	W	P	R	I	I	A	L	V	V	Q	P	G	V	E	F	D	H	T	N	V	I	D	Y	Q
Query Conservation
Alig confidence		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.				.			.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.				.			.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	P	S	L	Y	I	V	A	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	G	V	E	G	L	D	E	A	I	E	R	A	N	A	Y	V	K	.	A	G	A	.	D	A	.	.	.	.	I	F	P	E	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure		.	.	.	.	.		T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.		T		.	S		.	.	.	.				T	T			.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.				.			.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							154	.	.	.	.	.	160	.	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.		.	.					.	190	.	.	.	.	.													.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	K	A	S	A	L	S	Q	M	V	E	N	Y	E	T	L	I	F	E	A	H	S	T	D	Y	Q	T	P	Q	S	L	R	Q	L	V	I	D	H	F	A	I	L	K	V	G	P	A	L	T	F	A	L	R	E	A	L	F	S	L	A	A	I	E	E	E
Query Conservation
Alig confidence															.		.
Template Conservation															.		.
Template Sequence		E	E	E	F	R	L	F	N	S	K	V	N	A	.	P	.	L	L	A	N	X	T	E	F	G	K	T	P	Y	Y	S	A	E	E	F	A	N	X	G	F	Q	X	V	I	Y	P	V	T	S	L	R	V	A	A	K	A	Y	E	N	V	F	T	L	I	K	E
Template Known Secondary structure												S		S	.		.	B						T	T	S	S	S											T	T		S						S
Template Predicted Secondary structure															.		.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.		210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions