Job Description P0C8K0 Confidence 99.80% Date Thu Jan 5 11:30:07 GMT 2012 Rank 7 Aligned Residues 258 % Identity 18% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		H	L	T	E	M	V	R	Q	H	K	A	G	K	T	N	G	I	Y	A	V	C	S	A	H	P	L	V	L	E	A	A	I	R	Y	A	S	A	N	Q	T	P	L	L	I	E	A	T	S	N	Q	V	D	Q	F	G	G	Y	T	G	M	T	P	A	D	F	R	G	F	V	C	Q	L	A	D	S	L	.	N	F	P
Query Conservation																																																																														.
Alig confidence																.																																									.		.	.	.	.	.															.
Template Conservation																.																																									.		.	.	.	.	.
Template Sequence		K	G	N	E	I	L	L	K	A	H	K	E	G	Y	.	G	V	G	A	F	N	F	V	N	F	E	M	L	N	A	I	F	E	A	G	N	E	E	N	S	P	L	F	I	Q	A	S	E	G	A	I	K	Y	M	G	.	I	.	.	.	.	.	D	M	A	V	G	M	V	K	I	M	C	E	R	Y	P	H	I	P
Template Known Secondary structure														T		.								S	S															T																	.		.	.	.	.	.														S	T	T	S
Template Predicted Secondary structure																.																																									.		.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	A	L	I	L	G	G	D	H	L	G	P	N	R	W	Q	N	L	P	A	A	Q	A	M	A	N	A	D	D	L	I	K	S	Y	V	A	A	G	F	K	K	I	H	L	D	C	S	M	S	C	Q	D	D	P	I	P	L	T	D	D	I	V	A	E	R	A	A	R	L	A	K	V	A	E	E	T	C	L	E
Query Conservation
Alig confidence		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	V	A	L	H	L	D	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	F	E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	H	A	F	E	E	N	L	E	L	T	S	K	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	A
Template Known Secondary structure		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											T		S							T	T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					77	.	.	80	.	.	.	.																.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.															.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		H	F	G	E	A	D	L	E	Y	V	I	G	T	E	V	P	V	P	G	G	A	H	E	T	L	S	E	L	A	V	T	T	P	D	A	A	R	A	T	L	E	A	H	R	H	A	F	E	K	Q	G	L	N	A	I	W	P	R	I	I	A	L	V	V	Q	P	G	V	E	F	D	.	.	.	H	T	N	V	I	D
Query Conservation																																																																									.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	A	G	V	S	V	E	A	E	L	G	R	L	.	.	.	.	.	.	.	.	.	.	.	.	M	G	I	L	V	N	P	K	E	A	E	Q	F	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	Q	V	D	Y	L	A	P	A	I	G	T	S	H	G	A	F	K	F	K	G	E	P	K
Template Known Secondary structure				T	T								S			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.					S						S	S			S	S	S	B			S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.													.	140	.	.	.	.	.	.	.	.	.	150	.	.	.															.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	P	A	K	A	S	A	L	S	Q	M	V	E	N	Y	E	T	L	I	F	E	A	H	S	T	D	Y	Q	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	L	R	Q	L	V	I	D	H	F	A	I	L	K	V	G	P	A	L	T	F	A	L	R	E	A	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.					.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.					.	.	.
Template Sequence		L	D	F	E	R	L	Q	E	V	K	R	L	T	N	I	.	P	L	V	L	.	.	.	H	G	A	S	A	I	P	D	N	V	R	K	S	Y	L	D	A	G	G	D	L	K	G	S	K	G	V	P	F	E	F	L	Q	E	S	V	K	G	G	I	N	K	V	N	T	D	T	D	L	R	I	A	F	I	A	E	V
Template Known Secondary structure																S	.					.	.	.		S															T	T				T	T		B														T
Template Predicted Secondary structure																	.					.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		F	S	L	A	A	I	E	E	E	L	V	P	A	K	A	C	S	.	G	L	R	Q	V	L	E	D	V	M	L	D	R	P	E	Y	W	Q	S	H	Y	H
Query Conservation																			.
Alig confidence			.	.	.	.	.	.	.										.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	K	V	A	N	E	D	K	S	Q	F	D	L	R	K	F	F	S	P	A	Q	L	A	L	K	N	V	V	K	E	R	M	K
Template Known Secondary structure			.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		267								.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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