Return to main results Retrieve Phyre Job Id

Job DescriptionP0C8K0
Confidence66.88%DateThu Jan 5 11:30:07 GMT 2012
Rank44Aligned Residues250
% Identity16%Templatec2hjpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:phosphonopyruvate hydrolase; PDBTitle: crystal structure of phosphonopyruvate hydrolase complex with2 phosphonopyruvate and mg++
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50......... 60. ........70.......
Predicted Secondary structure 




















..

.

Query SS confidence 


























































. .

.















Query Sequence  MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPLLIEATSNQVDQFGGY. . TG. MTPADFRGFVCQLADS
Query Conservation 
  
  
    
 
   

 




   

 


  
 
   






 



  


..

. 

  
   
   
  
Alig confidence 
























......
























.

..

.















Template Conservation 
 
   

 
         
 
 
 ...... 


  
  

 

  
    
 

.
 

    
  
       
   
Template Sequence  MTKNQALRAALDSGRLFTAMAAHNP. . . . . . LVAKLAEQAGFGGIWGSGFELSASY. AVPDANILSMSTHLEMMRAIAST
Template Known Secondary structure 





SS......T
S
T.TS
TTT
S
TT
Template Predicted Secondary structure 







......






.










Template SS confidence 















































































   1........10.........20..... ....30.........40.........50 .........60.........70...
 
   78.80.........90. ........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 






..
























Query SS confidence 













. .































































Query Sequence  LNFPQDALILGGDH. . LGPNRWQNLPAAQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVA
Query Conservation         
 




..


  

 
   


  

 

   
 


  



 
     
   
    



 
 
   
Alig confidence 



...






..


............
















































Template Conservation     
...



 
 


  ............  
   
     

  

 



   
    
    
   

 

  
 
Template Sequence  VSIP. . . LIADIDTGFGNA. . . . . . . . . . . . VNVHYVVPQYEAAGASAIVMEDKTFPKDTQELVRIEEFQGKIAAATAAR
Template Known Secondary structure 
SS
...
TTTTSS............T
S
B
SS




B


Template Predicted Secondary structure 


...






............


















Template SS confidence 















































































   74... ..80......... 90.........100.........110.........120.........130........
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  EETCLEHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWPRIIALVVQPGVEFDHTN
Query Conservation 
             







 


         

       

     

   

     












    
Alig confidence 
........










..............














.
















.............
Template Conservation   ........     
 



..............
     
 



 

. 

 




 


    .............
Template Sequence  A. . . . . . . . DRDFVVIARVE. . . . . . . . . . . . . . ALIAGLGQQEAVRRG. QAYEEAGADAILIHSRQ. . . . . . . . . . . . .
Template Known Secondary structure  S........STTS
..............TTTTT

.TT
S



.............
Template Predicted Secondary structure 
........



..............


.







.............
Template SS confidence 















































































   146 ...150....... ..160.........170.. .......180.........
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  VIDYQPAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLVIDHFAILKVGPALTFALREALFSLAAIEEELVPAKACSG
Query Conservation 
       
  
      
  
 








   

  

 
 












 



 

  

 

      
 
Alig confidence  ...














.
.































...























Template Conservation  ...   

          .
.
 
               
   
   
     ...  
 
  
       
   
    
Template Sequence  . . . KTPDEILAFVKSWPG. K. VPLVLVPTAYPQLTEADIAALSKVGIVIYGNH. . . AIRAAVGAVREVFARIRRDGGIRE
Template Known Secondary structure  ...SSS


.S.S

GGG
TTS
T
TT
S...TSSTT
Template Predicted Secondary structure  ...




.
.














...



Template SS confidence 















































































   190.........200.... . ....210.........220.........230....... ..240.........250.........260.
 
   316
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  V
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   262
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions