Job Description P0C8K0 Confidence 93.25% Date Thu Jan 5 11:30:07 GMT 2012 Rank 14 Aligned Residues 176 % Identity 10% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		M	K	H	L	T	E	M	V	R	Q	H	K	A	G	K	T	N	G	I	Y	A	V	C	S	A	.	.	.	.	.	H	P	L	V	L	E	A	A	I	R	Y	A	S	A	N	Q	T	P	L	L	I	E	A	T	S	N	Q	V	D	Q	F	G	G	Y	T	G	M	T	P	A	D	F	R	G	F	V	C	Q	L	A
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L	K	D	M	A	A	L	.	.	.	.	.	.	.	.	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K
Template Known Secondary structure		T													T	T													T	T																T	T		S							T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.
		76	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.
Predicted Secondary structure					.	.																																																												.								.	.	.	.	.	.	.	.
Query SS confidence					.	.																																																												.								.	.	.	.	.	.	.	.
Query Sequence		D	S	L	.	.	N	F	P	Q	D	A	L	I	L	G	G	D	H	L	G	P	N	R	W	Q	N	L	P	A	A	Q	A	M	A	N	A	D	D	L	I	K	S	Y	V	A	A	G	F	K	K	I	H	L	D	C	S	M	S	C	Q	D	D	P	I	.	P	L	T	D	D	I	V	.	.	.	.	.	.	.	.
Query Conservation					.	.																																																												.								.	.	.	.	.	.	.	.
Alig confidence					.	.						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.														.								.	.	.	.	.	.	.	.
Template Conservation												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		D	T	Y	G	Q	K	T	Q	I	N	.	L	H	C	H	S	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	.	.	V	V	D	T	A	I	S	S	M	S	L	G	P	G	H	N	P	T	E	S	V	A	E	M	L	E	G	T	G
Template Known Secondary structure						T	T					.				B		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		S	.	.					B		G	G	G		S	T	T	S	B		B							T	T	T	T	T	T
Template Predicted Secondary structure												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.																.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
								145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																	.	.	.
Query SS confidence		.	.	.	.	.	.																																	.	.	.
Query Sequence		.	.	.	.	.	.	A	E	R	A	A	R	L	A	K	V	A	E	E	T	C	L	E	H	F	G	E	A	D	L	E	Y	V	I	G	T	E	V	.	.	.	P	V	P	G	G	A	H	E	T	L	S	E	L	A	V	T	T	P	D	A	A	R	A	T	L	E	A	H	R	H	A	F	E	K	Q	G	L	N	A
Query Conservation		.	.	.	.	.	.																																	.	.	.
Alig confidence		.	.	.	.	.	.																											.						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	T	N	L	D	Y	D	R	L	H	K	I	R	D	H	F	K	A	I	R	P	K	Y	K	K	F	E	S	K	T	L	.	V	D	T	S	I	F	K	S	Q	I	P	G	G	M	L	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	S	Q	L	R	A	Q	G	A	E	D
Template Known Secondary structure																						G	G	G	G	G	G	G			S		S	.				T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			T
Template Predicted Secondary structure																																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																			.	.	.	.	.	320	.	.	.	.	.	.
		216	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	P	R	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	D	E	V	M
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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