 |
Job Description | P0ACW6 | Confidence | 2.08% | Date | Thu Jan 5 11:19:17 GMT 2012 |
Rank | 73 | Aligned Residues | 68 |
% Identity | 12% | Template | c3lssA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:seryl-trna synthetase; |
PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp
|
Resolution | 1.95 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | P | E | Y | R | D | L | I | S | R | L | K | N | E | N | P | R | F | M | S | L | F | D | K | H | N | K | L | D | H | E | I | A | R | K | E | G | S | D | G | R | G | Y | N | A | E | V | V | R | M | K | K | Q | K | L | Q | L | K | D | E | M | L | K | I | L | Q | Q | E | S | V | K | E |
Query Conservation |   |
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
Template Sequence |   |
V | D | A | I | I | E | A | D | K | K | W | R | R | T | Q | F | L | T | E | A | S | K | K | L | I | N | I | C | S | K | A | V | G | A | K | K | K | A | K | E | A | . |
. |
. |
. |
C | V | L | Q | L | K | Q | L | S | K | D | L | S | D | Q | V | A | G | L | A | K | E | A | Q | Q | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|