 |
Job Description | P0A8D9 | Confidence | 2.36% | Date | Thu Jan 5 11:07:35 GMT 2012 |
Rank | 92 | Aligned Residues | 23 |
% Identity | 17% | Template | c3sajB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:glutamate receptor 1; |
PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain
|
Resolution | 2.50 Å |
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | E | K | R | L | A | P | V | F | V | E | N | . |
. |
R | V | I | K | M | T | R | Y | A | I |
Query Conservation |   |
|   |   |
|   |
|   |   |   |
|
|
|   | . | . |
|
|
|   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
P | N | N | I | Q | I | G | G | L | F | P | N | Q | Q | S | Q | E | H | A | A | F | R | F | A | L |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|