Job Description P42603 Confidence 3.97% Date Thu Jan 5 12:01:47 GMT 2012 Rank 18 Aligned Residues 99 % Identity 13% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	V	M	A	I	F	I	V	L	T	G	G	I	G	L	A	K	F	H	H	P	V	E	L	L	P	V	I	G	T	I	V	S	T	W	A	L	F	C	C	K	G	L	T	M	R	C	V	M	W	F	S	T	C	C	W	V	I	H	N	F	W	A	G	S	I	G	G	T	M	I	E	G	S	F	L	L	M	N
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N
Template Known Secondary structure																			T	T		S	S	S					G	G	G							.	.	.	.	.	.	.	.	.	.	.	.										T	T			B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		874	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.													910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	I	I	R	F	W	R	M	Q	K	R	G	I	D	P	F	K	V	E	K	T	P	S	A	V	D	E	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L
Template Known Secondary structure													T	T	S	S				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions