Return to main results Retrieve Phyre Job Id

Job DescriptionP42603
Confidence3.99%DateThu Jan 5 12:01:47 GMT 2012
Rank17Aligned Residues26
% Identity19%Templatec2d57A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:aquaporin-4; PDBTitle: double layered 2d crystal structure of aquaporin-4 (aqp4m23) at 3.2 a2 resolution by electron crystallography
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........
Predicted Secondary structure 
Query SS confidence 

























Query Sequence  YWLAQGVGVIAFLIGITTFFNRDERR
Query Conservation    


 

 

  
 
 

  
 
  
Alig confidence 

























Template Conservation 

 

 


  
              
Template Sequence  YITAQCLGAIIGAGILYLVTPPSVVG
Template Known Secondary structure 
TTTGGG
Template Predicted Secondary structure 






Template SS confidence 

























   118.120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions