 |
Job Description | P69490 | Confidence | 55.17% | Date | Thu Jan 5 12:11:44 GMT 2012 |
Rank | 28 | Aligned Residues | 57 |
% Identity | 11% | Template | d1eova1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Anticodon-binding domain
|
Resolution | 2.30 |
|
 |
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | Q | R | L | R | V | G | G | M | V | M | P | G | S | V | Q | R | D | P | N | S | L | K | V | T | F | T | I | Y | D | A | E | G | S | V | D | V | S | Y | E | G | I | L | P | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | F | R | E | G | Q | G | V | V | V | Q | G | E | L |
Query Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |
|   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |
|   |
|   |   | . | . |   |
|   |   |
|
|   |
| . |   |
|   |   |
|
|
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |
|   |
|
Template Sequence |   |
S | D | K | E | V | L | F | R | A | R | V | H | N | . |
. |
T | R | Q | Q | G | A | T | L | . |
A | F | L | T | L | R | Q | Q | A | S | L | I | Q | G | L | V | K | A | N | K | E | G | T | I | S | K | N | M | V | K | W | A | G | S | L | N | L | E | S | I | V | L | V | R | G | I | V |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
| S | S | S |  | . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
|
| S | S | S | S | S |
|  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
. | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|