Return to main results Retrieve Phyre Job Id

Job DescriptionP69490
Confidence72.33%DateThu Jan 5 12:11:44 GMT 2012
Rank19Aligned Residues61
% Identity23%Templated1c9oa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.17

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.........90.........100.... .....110.........120........
Predicted Secondary structure 
















...






Query SS confidence 





































. . .























Query Sequence  MPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFR. . . EGQGVVVQGELEKGNHILAKEVLA
Query Conservation    


        
 
 


    
 
 
 
  

 
 ...

  


 
     
 
 
  


Alig confidence 





































...














.







Template Conservation    
 

     





  
 
 


 
 
 
       
  
  
 
       
.  
  
  
Template Sequence  QRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRG. PQAANVVK
Template Known Secondary structure  TTTTTTGGGB
SSS




TT
TT.
Template Predicted Secondary structure 



























.
Template SS confidence 
































































   2.......10.........20.........30.........40.........50....... ..60.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions