Return to main results Retrieve Phyre Job Id

Job DescriptionP69490
Confidence56.79%DateThu Jan 5 12:11:44 GMT 2012
Rank26Aligned Residues80
% Identity24%Templatec1b8aB_
PDB info PDB header:ligaseChain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80... ......90.........100. ........110.........120
Predicted Secondary structure 













.







........







...
Query SS confidence 






























.

















. . . . . . . .


















. . .
Query Sequence  MPEVGQRLRVGGMVMPGSVQRDPNSLKVTFT. IYDAEGSVDVSYEGILPD. . . . . . . . LFREGQGVVVQGELEKGNH. . .
Query Conservation      
  




 
  


        
 
 .


    
 
 
 
  

........ 
 

  


 
     
 ...
Alig confidence 















..





...



.

















........


















...
Template Conservation      
  
 
 


  .. 
  

...
 

 


  
 



                
  

 
 
 
 
        
Template Sequence  EELNGQKVKVAGWVWE. . VKDLGG. . . IKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVNFTPKAKL
Template Known Secondary structure  GGGTT
..
SS...TTGGGS
GGG

TT

TTSTT
Template Predicted Secondary structure 


..




...


















Template SS confidence 















































































   1012.......1020....... ..1030... ......1040.........1050.........1060.........1070.........1080......
 
   121........130.......
Predicted Secondary structure  ...






Query SS confidence  . . .
















Query Sequence  . . . ILAKEVLAKHDENYTPP
Query Conservation  ...
 
  




 




 
Alig confidence  ...
















Template Conservation   


    
 


 
   

Template Sequence  GFEILPEKIVVLNRAETPLP
Template Known Secondary structure  S


SS
S
Template Predicted Secondary structure 







Template SS confidence 



















   1087..1090.........1100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions