Return to main results Retrieve Phyre Job Id

Job DescriptionP0A729
Confidence7.66%DateThu Jan 5 11:04:38 GMT 2012
Rank70Aligned Residues9
% Identity22%Templatec2xi1A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:nef; PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10........
Predicted Secondary structure 
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Query Sequence  SPWRRALLE
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Template Sequence  SQREKEILD
Template Known Secondary structure 
Template Predicted Secondary structure 
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   103......110.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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