 |
Job Description | P25906 | Confidence | 35.06% | Date | Thu Jan 5 11:42:45 GMT 2012 |
Rank | 47 | Aligned Residues | 66 |
% Identity | 12% | Template | c3oqbF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:oxidoreductase; |
PDBTitle: crystal structure of putative oxidoreductase from bradyrhizobium2 japonicum usda 110
|
Resolution | 2.60 Å |
|
 |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | L | S | D | V | A | A | S | L | G | A | T | P | M | Q | V | A | L | A | W | L | L | Q | R | S | P | N | I | L | L | I | P | G | T | S | S | V | A | H | L | R | E | N | M | A | A | E | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | H | L | S | E | E | V | L | S | T | L | D | G | I | S | R | E |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |   |   |
|   |
|   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   |   |   |   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
E | K | V | E | A | L | A | K | R | F | N | I | A | R | W | T | T | D | L | D | A | A | L | A | D | K | N | D | T | X | F | F | D | A | A | T | T | Q | A | R | P | G | L | L | T | Q | A | I | N | A | G | K | H | V | Y | C | E | K | P | I | A | T | N | F | E | E | A | L | E | V | V | K | L | A | N | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|  |  |
| S |
|  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |
| S |
| T | T | T |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
| S |
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|